CDS

Accession Number TCMCG073C37060
gbkey CDS
Protein Id XP_010522987.1
Location complement(join(4680945..4681030,4681317..4681495,4681577..4681661,4681753..4681980,4682105..4682165,4682253..4682323,4682411..4682520,4682609..4682741,4682841..4682991,4683074..4683176,4683267..4683375,4683475..4683631,4683800..4683901,4683990..4684107,4684250..4684571,4684903..4685026,4685110..4685166))
Gene LOC104801417
GeneID 104801417
Organism Tarenaya hassleriana

Protein

Length 731aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010524685.1
Definition PREDICTED: ribosome biogenesis protein BOP1 homolog isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category J
Description Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14824        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000463        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070545        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGGAGAACAAAAGGGTTTTTTCAGGGACTGACTTTTCCGACAACGATGAAGATAGTTTGTCCGGGTCTTTACATTCCGATGATTTTGATTCCGACGTTTACGACTCTGAGGCTGAGGCGTCTTCGTTGAGAGAGACAGAATCCGCAGATGAAGAATCCTCCGGTGACGAGGTACATGTGCCTGTGCAGGATGCTGTTGATACAGACAATGTGACAGATGATAATGAGGATGGAGATGGTGTCAAGGGCGATGACTTGGACAGTGACCATGGCGAGGAAGGTGAGAGTGAAGGCTCTGAGCCTGATCAACCGCCGGAGGAAGAGAGCGATTCTTCTGAAGACGAGGTTGCCCCAAGGAATACAATCGGAGACGTTCCCCTGGAGTGGTATAGGGATGAGAAGCATGTTGGATATGACTTCACGGGGAAGAAAATAACTAAGAAAGAAAGACAAGACAAACTCGATTCCTTTCTTGCAAGTGTGGATGATTCAAAGAACTGGCGCAAAATTTATGATGAATATAACGATGAGGAAGTTGAGCTTACTAAAGAAGAGACCAAGCTTATTCGTAGAATGCTCAAAGGGGAGGCGCCACATGCTGACTTTGATCCATATGCGCCTTATGTTGATTGGTTCAAATGGGACGATGCGAAACATCCACTGTCAAGTGCGCCAGAACCGAAGAGGAGATTCCTTCCTTCCAAATGGGAAGCCAAAAAGGTTGTTAAGTATGTTCGAGCAATCCGACAGGGCTTAATAAAGTTTGACAAGCCGGAAGAAGAGCCCAATGTCTACCTCTTATGGGGTGACGATTCTAGATCCGATGAAAAGAGCAAACATCTATCTTATATTCCTCCACCGAAGCTGAAATTGCCAGGGCACGAAGAATCATACAACCCTTCATTGGAGTACATTCCTACGGAGGAAGAAAAGGCCTCCTATGACTTGATGGATGAGGAAGATCGCCCAAAATTTATTCCCAAGAGGTTTACATCTCTCAGAAGCATCCCAGCATATGAGAATGCACTGAAGGAGTCGTTTGAGCGTTGTTTGGATCTATACCTGTGTCCAAGAGTTCGAAAGAAGCGGATAAATATTGATCCTGAGTCTTTGAAGCCCAAGCTACCTAGTAGAAAGGATCTTAGGCCTTACCCTGTTACCTGCTATCTTGAGTATAGGGGTCATACTGGCGCAGTTACATCTATATCTACTGATTCTTCGGGGCAGTGGATAGCTTCAGGTTCAACTGATGGCTCGGTTCGTGTATGGGAGGTGGAGACTGGTAGATGTCTTAAGATTTGGGAGTTTGGTGAGGCTGTTCAGCGTGTAGCTTGGAACCCTCTTCCAGAACTTCCGATTTTGGCCGTCTCCATGGGCCCTGATTTAGTTATTCTGGACACTGGGCTTGGGAATGATGAGGACCAGAAAAAGATTAAAGAGTTGCTGCTCTTGGAAAAGCCTTCATCAGCACCAGACGATAATGACAACATGGCATCGATTGTGAGCTGGTTTCCGGAGGACAAATATGGAGGGATCAGGCTAAGACATTTCAAGAACGTATCCTATGTTGAATGGCATCGGAAAGGAGACTATCTCTCAGCAGTTATGCCTGCAGGTGAAACTAGAGGGATTGTCGTGCACCAGCTTTCCAAGAAGCTTACGCAAAAGATACCGTTTAAACTGCATGGACTTCCTGTGTCTACCCTTTTCCATCCGAGGCTTTCCATCTTCTTCATCGCAACAAAGAAGAATGTCCGTGTCTATGATCTGCTGAAGAAGAGGCTCATCAAAAAGCTCGAGACCGGATTGCGGGAAGTCTCATCCATGTCCATTCACCCCTCTGGTGATAATCTTATTGTGGGTAGTAAAGAGGGAAAGATATGCTGGTTTGACATGGACCTGTCAACTAGACCATACAAGACTCTAAAGAATCATCCGAAAGACATCACCAACGTGGCATTCCATCGGTCGTACCCGTTATTTGCATCGTGCTCGGATGATTGCACAGCCTATGTCTTCCATGGTATGGTTTACAATGATCTGAACCAGAACCCTCTGATAGTACCCCTGGAAATTCTTCGAGGTCATACTGCCTCAAATGGACGAGGAGTGTTGGACTGCAAGTTCCACCCGAGACAGCCATGGCTATTTACAGCGGGAGCCGACTCGACCATCAAACTTTACTGCCACTGA
Protein:  
MTENKRVFSGTDFSDNDEDSLSGSLHSDDFDSDVYDSEAEASSLRETESADEESSGDEVHVPVQDAVDTDNVTDDNEDGDGVKGDDLDSDHGEEGESEGSEPDQPPEEESDSSEDEVAPRNTIGDVPLEWYRDEKHVGYDFTGKKITKKERQDKLDSFLASVDDSKNWRKIYDEYNDEEVELTKEETKLIRRMLKGEAPHADFDPYAPYVDWFKWDDAKHPLSSAPEPKRRFLPSKWEAKKVVKYVRAIRQGLIKFDKPEEEPNVYLLWGDDSRSDEKSKHLSYIPPPKLKLPGHEESYNPSLEYIPTEEEKASYDLMDEEDRPKFIPKRFTSLRSIPAYENALKESFERCLDLYLCPRVRKKRINIDPESLKPKLPSRKDLRPYPVTCYLEYRGHTGAVTSISTDSSGQWIASGSTDGSVRVWEVETGRCLKIWEFGEAVQRVAWNPLPELPILAVSMGPDLVILDTGLGNDEDQKKIKELLLLEKPSSAPDDNDNMASIVSWFPEDKYGGIRLRHFKNVSYVEWHRKGDYLSAVMPAGETRGIVVHQLSKKLTQKIPFKLHGLPVSTLFHPRLSIFFIATKKNVRVYDLLKKRLIKKLETGLREVSSMSIHPSGDNLIVGSKEGKICWFDMDLSTRPYKTLKNHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYNDLNQNPLIVPLEILRGHTASNGRGVLDCKFHPRQPWLFTAGADSTIKLYCH